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rbsA [2019-08-12 08:50:59]
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rbsA [2019-08-12 08:50:59]

ribose ABC transporter (ATP-binding protein)
Locus
BSU_35940
Isoelectric point
6.18
Molecular weight
54.36 kDa
Protein length
493 aa Sequence Blast
Gene length
1482 bp Sequence Blast
Function
ribose uptake
Product
ribose ABC transporter (ATP-binding protein)
Essential
no
E.C.
3.6.3.17
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Cellular processes → Transporters → ABC transporters → Importers → Uptake of carbon sources
  • Metabolism → Carbon metabolism → Utilization of specific carbon sources → Utilization of ribose
  • Groups of genes → Membrane proteins

    • Gene

    Coordinates
    3,703,682 3,705,163

    The protein

    Catalyzed reaction/ biological activity

  • ATP + H2O + monosaccharide(Out) = ADP + phosphate + monosaccharide(In) (according to Swiss-Prot)

    • Protein family

  • ABC transporter superfamily (according to UniProt)

    • Paralogous protein(s)

  • NupO

    • Structure

  • 1G9X (from Methanocaldococcus jannaschii, 36% identity) PubMed

    • Localization

  • attached to the cell membrane (via RbsC-RbsD) PubMed

    • Expression and Regulation

    Operons

    Genes
    rbsR-rbsK-rbsD-rbsA-rbsC-rbsB
    Description
    PubMed

    Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon

    • Regulatory mechanism

  • CcpA: repression, PubMed, in CcpA regulon
  • AbrB: activation, PubMed, in AbrB regulon

    • Regulation

  • expressed upon transition into the stationary phase (AbrB) PubMed
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    Biological materials

    Mutant

  • BKE35940 (rbsA::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_AATCTGCATGTTTCATCTTC, downstream forward: _UP4_ACACTTGCCACGGGAGGGCG
  • BKK35940 (rbsA::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_AATCTGCATGTTTCATCTTC, downstream forward: _UP4_ACACTTGCCACGGGAGGGCG

    • References

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